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| Team | Who | Where | What |
| 1 | J Bartholomé, B Brachi, C Bodénès, ML Desprez-Loustau, E Guichoux, A Kremer, G Le Provost, T Leroy, F Ehrenmann, C Lalanne, C Plomion, F Salin | BIOGECO, INRA, Univ. Bordeaux, 33620 Cestas France | Coordination of the project
Construction of a composite gene-based linkage map Genetic diversity and somatic mutation analyses Manual curation of MLO gene family and candidate genes involved in bud dormancy GO term enrichments and gene family expansion analysis in trees versus herbaceous species |
| 2 | JM Aury, V Barbe, C Belser, A Couloux, C Da Silva, C Dossat, S Faye, K Labadie, A Lemainque, MA Madoui, S Mangenot, J Mercier | Commissariat à l’Energie Atomique (CEA), Institut de Génomique (IG), Genoscope, F-92057 Evry, France | Sequencing and assembly |
| 3 | T Alaeitabar, J Amselem, N Francillonne, I Luyten, F Maumus, C Michotey, H Quesneville | URGI, INRA, Université Paris-Saclay, 78026 Versailles, France | TE and gene annotation.
Genome browser and OakMine Interface |
| 4 | F Murat, J Salse | GDEC, INRA, UBP, F-63039 Clermont-Ferrand, France | Macro-evolutionary analyses |
| 5 | S Duplessis, C Marchal, E Morin, A Kohler, F Martin, A Hecker, N Rouhier | IAM, INRA, Université de Lorraine, F-54280 Champenoux, France | Manual curation of NB-LRR, thioredoxin, glutaredoxin and glutathione transferase gene families
Gene families Manual curation of genes involved in ectomycorrhizal interactions |
| 6 | I Lesur | HelixVenture, F-33700 Mérignac, France | Identification of allelic gene pairs and tandem duplicated genes |
| 7 | P Faivre-Rampant | EPGV, INRA, CEA-IG, CNG Centre National de Génotypage, F-92057 Evry, France | BAC analysis |
| 8 | JC Leplé | AGPF, INRA, F-45075, Orléans, France | Manual curation of the laccase gene family |
| 9 | N Chantret, A Diévart | AGAP, INRA, CIRAD, Supagro, F-34060 Montpellier, France | Manual curation of the laccase gene family |
| 10 | J Chen, M Lascoux | Department of Ecology and Genetics, Evolutionary Biology Centre, Science for Life Laboratory, Uppsala University, 752 36 Uppsala, Sweden | Analysis of the efficacy of purifying selection in oak |
| 11 | H Bergès | CNRGV, INRA, F-32326 Castanet, France | Preparation of high molecular weight DNA for sequencing |
| 12 | MB Bogeat-Triboulot, D Cohen, I Hummel | EEF, INRA, Université de Lorraine, F-54280, Champenoux, France | Manual curation of the aquaporin gene family. |
| 13 | ML Bouffaud, M Tarkka | Department of Soil Ecology, UFZ – Helmholtz Centre for Environmental Research, 06220 Halle/Saale, Germany | Manual curation of the SWEET gene family |
| 14 | C Gaspin, C Klopp, O Rué | Plateforme bioinformatique Toulouse Midi-Pyrénées, INRA, F-32326 Auzeville Castanet-Tolosan, France | Annotation of noncoding RNA
OrthoMCL analysis |
| 15 | J Grima-Pettenati | Université de Toulouse, CNRS, UMR 5546, LRSV, F-32326 Castanet-Tolosan, France. | Manual curation of MYB gene family |
| 16 | S Herrmann | German Centre for Integrative Research (iDiv), Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany | Annotation of genes involved in ectomycorrhizal interaction |
| 17 | P Hugueney, C Rustenholz, A Velt | Université de Strasbourg, INRA, SVQV UMR-A 2232, F-68000 Colmar, France | Manual curation of candidate gene for gallotannins production |
| 18 | E Lasserre, O Panaud, N Picault | Université de Perpignan, UMR 5096. F-66860 Perpignan, France | Analysis of TEs and genome dynamics |
| 19 | M Soler | Laboratori del Suro, University of Girona, E-17071 Girona, Spain | Manual curation of MYB gene family |
| 20 | A Zanne | Department of Biological Sciences, George Washington University. Washington, DC 20052, USA | Prospect analysis to identify genes related to the tree habit. |
| 21 | P Wincker | Genoscope, CEA, CNRS UMR 8030, Université d’Evry, France | Coordination of the sequencing activities |